PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012847-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 216aa    MW: 24361.2 Da    PI: 6.5699
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012847-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB174.88.9e-5563159197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yreleg
  AUR62012847-RA  63 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEG 157
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     e+
  AUR62012847-RA 158 ER 159
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MKLSSEAPPG EMNHIRATIN GKVFSHDDMS HHHLNNNNGN NNFNGSSNHS VSSTDQDNNE  60
CTVREQDRFM PIANVIRIMR KILPPHAKIS DDAKETIQEC VSEYISFITG EANERCQREQ  120
RKTITAEDVL WAMSKLGFDD YIEPLTLYLH RYRELEGERG SIRTCEPLLK LSRVAMDQYA  180
AFGPVFHIGP PPSHHHHGYF GGSSSMNGYL KDASF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.29e-73NF-YB family protein