PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012538-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 354aa    MW: 38526 Da    PI: 4.4652
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012538-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29e-062442811254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  AUR62012538-RA 244 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 281
                     677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MGEEFQGGVC GGTWWNPPHN IFSSGLSTPC SVAQLSGGSF DVGSFGWPNE VVVKGSNNKS  60
SNNNSVFDNL IFPDQIDSSL DILGFGLSPT SSTTDWNNHH NLLCDNNGSN EANFDSMLQD  120
NMNSSRLCNS YEMGVNSPNI MNSTNFSNNT QDASPPLALT ASSNSSGDSS TITCDGSLAT  180
SFPMNSSASY FIQSLFDDSD ESHHQGNSEE HRRESKNNTS NNDQPQAKRP RIETPSPLPT  240
FKVRKEKLGD RITALQQLVS PFGKTDTASV LHEAIEYIKF LHDQVNVLST PYLKNGTAMQ  300
QKESDKLKDN EDSNQDLRSR GLCLVPISST YPVAQETPVD FWTPTFGGTT TFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-51bHLH family protein