PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012493-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 320aa    MW: 35828.9 Da    PI: 6.248
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012493-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W  eEd++l+d++++ G+g+W+t +++ g+ R++k+c++rw +yl
   AUR62012493-RA 14 KGPWLLEEDQKLIDYIQKNGPGNWRTLPKKAGLERCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.74.7e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   AUR62012493-RA  67 RGRFSFEEEEAIIQLHSVLGNK-WSAIAAKLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRAPCCNRD GLKKGPWLLE EDQKLIDYIQ KNGPGNWRTL PKKAGLERCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEEAIIQ LHSVLGNKWS AIAAKLPGRT DNEIKNYWNT HIRKRMLRMG  120
IDPVTHTRRL DYLDLPSLLG NHPSILQNSS DQLNLLKLLV FDETNTMKTS LNHQQQYPTN  180
YSSSNEQLFA AAAQTSPLLN DQWQQNSNSA GFSSEAAVNI QDSGNYQALM DSLLDTLGLN  240
SANNNTSNNH EGLKMPSLLS TPSSSQQTTP PLSTSNSAYQ PNSSSTTTTS SEDEIDSYCE  300
NLMNFDVSFD IFDNNVLCL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.12e-92MYB family protein