PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012109-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 816aa    MW: 91297.2 Da    PI: 7.4948
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012109-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS383.33e-1173977681374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL  cA+av s+d+++a+ lL ++++ +sp+gd +qR+a+yf+ +L+arla+ ++ +y+ l + ++s    ++ l a+++f  v+P+ k+++
  AUR62012109-RA 397 LRSLLSLCAQAVGSNDQRNANDLLRQIRQYSSPTGDGNQRMAHYFADGLEARLAGVGTPIYSCLLTGPAS---AVDILRAYHMFLAVCPFKKIGN 488
                     578999*******************************************************999999988...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I   +e+++r+HiiD++i +G+QWp+L+q L+sRp+gpp++R+Tgv+ p++g   ++++eetg+rL+++Ae++++pfefn+ vak++e+
  AUR62012109-RA 489 FFSNRTIAAVAEKATRLHIIDIGIVYGFQWPCLFQRLSSRPGGPPRIRLTGVDLPQPGfrPAKRVEETGRRLKNYAESFNIPFEFNA-VAKKWET 582
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E+l+Vn++l+l+++++e++ +e +rd vL+lvk+++P ++++   +   ns+ F +rf eal ++s+lfd+le++lpr+ +eri
  AUR62012109-RA 583 VTVEDLKIDSDEVLVVNCMLRLKYVPEETAMVECPRDMVLNLVKQIKPAIFIHGVVNGAFNSPFFITRFREALFHFSTLFDMLETNLPRDIQERI 677
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++gr+++nv+aceg er+er et+++W+ r e+aGF+++pl+ ++ + ak  ++ v+ + y+++e+ ++l++gWk+r ++++S W+
  AUR62012109-RA 678 LIEREIFGRQAMNVIACEGLERIERPETYKQWQVRNERAGFRQLPLNPEILNMAKKRVKSVYHKDYSIDEDGNWLLQGWKGRIVYALSTWK 768
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MDPQLEELYG TLHRIKFNNH KVPNLASNNH FDTAKLQDPN LNLSFANPPL IHQNPNFNVG  60
VPSVSQETDS SLHEDYDLSD VVLKYITQVL MEEDEEEKTR SHHEPSALEA TEKTLYEVIG  120
EKYPSPQNLY NLPNAKHDSW NFNGAGSLIT DSYSGASSSS SLVHSNWPVN PYEYNPVPIV  180
DFSKPSSNLS LQTSNSSSNS SGRQFDVHFN YDSPYSTASN LFGLADATAE SPVSALNVSE  240
IFNDSQSMLQ FQKGLKEASK FLPNVLLSKD LMNNGSSQKL VGAASRDAVI KLENMHNNQI  300
PADLLIGTKH RSRDDFQLEE RRGNKQSAVS HVSDEAVMRS EMFDKVLLCS GGKNDAALRE  360
VLQSGLNKSA QNSQPKGSGG GRGRGRRQGS RIEVIDLRSL LSLCAQAVGS NDQRNANDLL  420
RQIRQYSSPT GDGNQRMAHY FADGLEARLA GVGTPIYSCL LTGPASAVDI LRAYHMFLAV  480
CPFKKIGNFF SNRTIAAVAE KATRLHIIDI GIVYGFQWPC LFQRLSSRPG GPPRIRLTGV  540
DLPQPGFRPA KRVEETGRRL KNYAESFNIP FEFNAVAKKW ETVTVEDLKI DSDEVLVVNC  600
MLRLKYVPEE TAMVECPRDM VLNLVKQIKP AIFIHGVVNG AFNSPFFITR FREALFHFST  660
LFDMLETNLP RDIQERILIE REIFGRQAMN VIACEGLERI ERPETYKQWQ VRNERAGFRQ  720
LPLNPEILNM AKKRVKSVYH KDYSIDEDGN WLLQGWKGRI VYALSTWKPV YEDLSGTKKG  780
QGEMKPLLTN HHASSVGTVI VEKRCFALLM RSSSS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1384391RGRRQGSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-178GRAS family protein