PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011908-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 503aa MW: 55631 Da PI: 6.683

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011908-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.7e-13	356	403	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h +Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq AUR62011908-RA 356 MSHVLAERQRREKLNQRFYALRAVVPNiS------KMDKASLLLDAISYINDLQ 403 68999********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MGQNYVLKEE EKVMVEAVVG KDAYNFLMST ACDDSLSEFN PPGDILNLQQ GLCQIVDGSS 60 WNYAIFWQIA SSKNGKTVLI WGDGHCRDPK AVLARESVDG GNGKFGKNEA KKRVLEKLHA 120 CFGGSVEDNF AATLDKVSDV EMLYLTSMYY WFRLDSSLGP AKSFTSGRPI WVSDVRSCLD 180 HYQSRAHLAK SAMFQTVVFV PVKTGVLELG SVRTVMEEHS LVQMVKTVFG ESHSFPARAS 240 PKVFGRDLSL GSGSRPRSMN ISFAPKKEDD ASFSAESHVA GNDIGPKNIF VSPSNGKHGE 300 HGDKKLFSEI NFGGSNPETD FPALDEASKE FLLHAAELRA RKRPVRRPAS GREEAMSHVL 360 AERQRREKLN QRFYALRAVV PNISKMDKAS LLLDAISYIN DLQTKISALE AEKEAANPKQ 420 EELPLPEIDF QARQDDALVH VSFPLDDHPV SKVVRTLREH QLVALEANVS TADDKMVHTF 480 KIQAQTEGAE NLKEKLETAL SK*

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MGQNYVLKEE EKVMVEAVVG KDAYNFLMST ACDDSLSEFN PPGDILNLQQ GLCQIVDGSS  60
WNYAIFWQIA SSKNGKTVLI WGDGHCRDPK AVLARESVDG GNGKFGKNEA KKRVLEKLHA  120
CFGGSVEDNF AATLDKVSDV EMLYLTSMYY WFRLDSSLGP AKSFTSGRPI WVSDVRSCLD  180
HYQSRAHLAK SAMFQTVVFV PVKTGVLELG SVRTVMEEHS LVQMVKTVFG ESHSFPARAS  240
PKVFGRDLSL GSGSRPRSMN ISFAPKKEDD ASFSAESHVA GNDIGPKNIF VSPSNGKHGE  300
HGDKKLFSEI NFGGSNPETD FPALDEASKE FLLHAAELRA RKRPVRRPAS GREEAMSHVL  360
AERQRREKLN QRFYALRAVV PNISKMDKAS LLLDAISYIN DLQTKISALE AEKEAANPKQ  420
EELPLPEIDF QARQDDALVH VSFPLDDHPV SKVVRTLREH QLVALEANVS TADDKMVHTF  480
KIQAQTEGAE NLKEKLETAL SK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-139	bHLH family protein