PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011426-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 410aa MW: 45530.8 Da PI: 6.8478

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011426-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	268	323	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGG+++AtPk+i+elm v+gLt+++vkSHLQkYRl+ AUR62011426-RA 268 KQRRCWSPELHRRFVDALTQLGGPQVATPKQIRELMRVDGLTNDEVKSHLQKYRLH 323 79****************************************************97 PP
2	Myb_DNA-binding	48.7	1.8e-15	270	321	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg+ t+k I + m g+t ++ks++qky+ AUR62011426-RA 270 RRCWSPELHRRFVDALTQLGGPqvaTPKQIRELMRvDGLTNDEVKSHLQKYR 321 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGLVCPELSL DLKPSYVSET INGFLSEVSM IGDVSERLNK VDGFVTQLEA ELNKIEVFKR 60 ELPLCMLLLK EAISYLKQES SQYKTRNAHQ PVLEEFIPLK KEAENTELNK TSEDDSGKDK 120 KNWMSSVQLW NSPHLIRNSN SNQVQNHVSE SPKVALSSNS MQFDEKKNQN LGGEIHDLSK 180 IRGGSKGFVP LVHGNYPTSN FPELRRKVDK EDVSVSGLTL VVPGMINHPE EDSISRVFNP 240 KLGSTRVSNS SPPASIGRPS HQQPSARKQR RCWSPELHRR FVDALTQLGG PQVATPKQIR 300 ELMRVDGLTN DEVKSHLQKY RLHTRRVPND SGNKNEQAMS GSWTAQDQYS ESSKPSSSQS 360 ASPEGPLQFP GLTGCTSTTG GDSMDEEDDD KSETHSWKGH AHKTGKDDV*

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGLVCPELSL DLKPSYVSET INGFLSEVSM IGDVSERLNK VDGFVTQLEA ELNKIEVFKR  60
ELPLCMLLLK EAISYLKQES SQYKTRNAHQ PVLEEFIPLK KEAENTELNK TSEDDSGKDK  120
KNWMSSVQLW NSPHLIRNSN SNQVQNHVSE SPKVALSSNS MQFDEKKNQN LGGEIHDLSK  180
IRGGSKGFVP LVHGNYPTSN FPELRRKVDK EDVSVSGLTL VVPGMINHPE EDSISRVFNP  240
KLGSTRVSNS SPPASIGRPS HQQPSARKQR RCWSPELHRR FVDALTQLGG PQVATPKQIR  300
ELMRVDGLTN DEVKSHLQKY RLHTRRVPND SGNKNEQAMS GSWTAQDQYS ESSKPSSSQS  360
ASPEGPLQFP GLTGCTSTTG GDSMDEEDDD KSETHSWKGH AHKTGKDDV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-51	G2-like family protein