PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011390-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Trihelix

Protein Properties

Length: 293aa MW: 32734.3 Da PI: 10.2634

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011390-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.6	2.2e-20	45	135	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt +e+ aLi+a+r+++ +lrrg+l++++W++v++ + + ++++qC++k+e+l+kry+ + +++k+ + + ss++ yf++++ AUR62011390-RA 45 CWTPDETSALIDAYRDKWYSLRRGNLRAAHWQDVADTIhrlcPHVSPPKTSVQCRHKMEKLRKRYRSELQRAKSIpHHRFSSSWIYFSKMD 135 8**********************************944444455566779******************988999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MASSSPPHQP PPFSDYLDPP LGIPLLLPAP PPPPPPPSRR LPPPCWTPDE TSALIDAYRD 60 KWYSLRRGNL RAAHWQDVAD TIHRLCPHVS PPKTSVQCRH KMEKLRKRYR SELQRAKSIP 120 HHRFSSSWIY FSKMDSMEKG NSGPASSAGN GFQEISNPNP NPRFGFNSSI QSRCNEFGSP 180 PNQFDVGPRY SGSYGSNGGG GFSSGNGLGV MKMIKKKRSA LGKKEGRREA GDNVAMAMVE 240 AIRMLGEGYV RTEMTKMEMV RDSEKARMDI EMNRTRMMLE YHQSIVETFV RG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-40	Trihelix family protein