PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011268-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 448aa MW: 48723.9 Da PI: 7.5675

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011268-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46.3	9.6e-15	107	139	23	55
G2-like 23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +e+A Pk+il+lm+v+gLt+e+v+SHLQkYRl AUR62011268-RA 107 PEEEAFPKKILDLMDVEGLTREKVASHLQKYRL 139 5689****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MASLENERFP KGLRVLVVDD DNTSLKLMDN LLRKCHFHVL SAYSDTNRVM EGVMSGACDY 60 LVKPVRIQEL QNIWQHVLRR KQKAAGGGKS APIRIGRNAS GNRREGPEEE AFPKKILDLM 120 DVEGLTREKV ASHLQKYRLY LRKISSGQAA GNRVVSVGTE DSHIGSIGGG YGVYRSLAGA 180 GSFPGFSSLP DQGVGFRGIS SSPLLQTPRF PNPLSFSGNQ NANLFQGNPT TIQMNNRLPL 240 LSPPTASMML NTNQLGIGLD PRGKVSWGNP IQPLSCPQNL LPTNNVSGGD ITPLNAQIHN 300 DPLDFLYGTD RNALSQDRPS SLNNFNIPQP IQKPNYFMNL CNISNTPSSL ILTVAPTHGE 360 NLRQNNIIGV PSLSQLEDTS PQSQQQNEAQ KSFDDSTLLG DPKLQCGTGH NTTESLDDIV 420 GRFLKQGNNA EAAAAQEDLE LDPFLMK*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MASLENERFP KGLRVLVVDD DNTSLKLMDN LLRKCHFHVL SAYSDTNRVM EGVMSGACDY  60
LVKPVRIQEL QNIWQHVLRR KQKAAGGGKS APIRIGRNAS GNRREGPEEE AFPKKILDLM  120
DVEGLTREKV ASHLQKYRLY LRKISSGQAA GNRVVSVGTE DSHIGSIGGG YGVYRSLAGA  180
GSFPGFSSLP DQGVGFRGIS SSPLLQTPRF PNPLSFSGNQ NANLFQGNPT TIQMNNRLPL  240
LSPPTASMML NTNQLGIGLD PRGKVSWGNP IQPLSCPQNL LPTNNVSGGD ITPLNAQIHN  300
DPLDFLYGTD RNALSQDRPS SLNNFNIPQP IQKPNYFMNL CNISNTPSSL ILTVAPTHGE  360
NLRQNNIIGV PSLSQLEDTS PQSQQQNEAQ KSFDDSTLLG DPKLQCGTGH NTTESLDDIV  420
GRFLKQGNNA EAAAAQEDLE LDPFLMK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-35	ARR-B family protein