PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010997-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 324aa    MW: 37176.8 Da    PI: 6.8449
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010997-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.17.8e-35141062103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k++++++d+++++lisw + +nsf+v+++ ef++++Lp++Fkh+nf+SFvRQLn+YgFkkv+ ++         weF++++F +g+k+ll++
  AUR62010997-RA  14 FVMKTHQMVSDPSTDHLISWGRANNSFIVVEPLEFSQRILPSFFKHNNFSSFVRQLNTYGFKKVDPDR---------WEFANEWFLRGQKQLLRN 99 
                     9********************999*****************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i rkk++
  AUR62010997-RA 100 IARKKHT 106
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MVKMEQNGNM IAPFVMKTHQ MVSDPSTDHL ISWGRANNSF IVVEPLEFSQ RILPSFFKHN  60
NFSSFVRQLN TYGFKKVDPD RWEFANEWFL RGQKQLLRNI ARKKHTNRPH PHLQDADDHE  120
LLVEIERLRE EQKTLDDELK GMNRRLEATE RRPQQMMAFL CKVVEDPDIL PRVMMERDRT  180
KHLCSGGGDD GAASPEKRRR LLMMSSSTSS SGMAHSYSEE DEGTNAGAIS SSHINFEVDK  240
FPHSPSSPNT CNSPMYSNRL QYSKGQYNCI SVNSEPLPLD LVPKYDHFQR GLDNSVYLGH  300
SPNYMTLKEE NPSYPFSLLD GSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197201KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-79HSF family protein