PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010953-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 587aa MW: 63224.5 Da PI: 7.7607

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010953-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.1	1.7e-13	109	148	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C++C+N+ e+ AUR62010953-RA 109 RQKQCNCKHSRCLKLYCECFASGVYCDG-CNCNNCCNNVEN 148 689***********************.******9875 PP
2	TCR	51.1	2.7e-16	192	231	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e AUR62010953-RA 192 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 231 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MEERDEGGNS LPKSSMATDI PAKKLARQLD FTSISGASQP PTTSVVQPPS TPSAQPPLPQ 60 PPSQQLMITP SQQPPAQTPP LPSMRVVKPE SPKARSRPTV ETKDGTPKRQ KQCNCKHSRC 120 LKLYCECFAS GVYCDGCNCN NCCNNVENEA ARRDAVEATL ERNPNAFRPK IASSPHGIRD 180 RREDAGDVVV AKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCIDCKNF EGSEERQALF 240 HGEHANNLTY MQQAANAAIT GAIGSSGFTS TPNSRKRKGQ DLLFGPASKD PSLSRVGQFQ 300 QANHVKTSGP SAVSLSPASR AANSVSLGAS KFTYRSLLAD IIQPQDVKEL CSVLVVLSEE 360 AAKTIAESNK ANEKRADDGG ENQQASTQDR FQSQDDSDVK TVPDGSVSGN QTDRIVPDDS 420 NLDGNDQPKS RPMSPLTLAL RCDEQDTMFM AAGSPSRLGN HVHASSSQCS EQSTSEVYAE 480 QERIVMTKFR DSLNSLITFG ELRETKLSSL ARSNYTSFQE TGNGTAKLRT DGQNQQDHNN 540 GVAKPVITAP IKTPAMIAAT ITAIPSNNHI SQNPPLTENG DVKPSI*

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MEERDEGGNS LPKSSMATDI PAKKLARQLD FTSISGASQP PTTSVVQPPS TPSAQPPLPQ  60
PPSQQLMITP SQQPPAQTPP LPSMRVVKPE SPKARSRPTV ETKDGTPKRQ KQCNCKHSRC  120
LKLYCECFAS GVYCDGCNCN NCCNNVENEA ARRDAVEATL ERNPNAFRPK IASSPHGIRD  180
RREDAGDVVV AKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCIDCKNF EGSEERQALF  240
HGEHANNLTY MQQAANAAIT GAIGSSGFTS TPNSRKRKGQ DLLFGPASKD PSLSRVGQFQ  300
QANHVKTSGP SAVSLSPASR AANSVSLGAS KFTYRSLLAD IIQPQDVKEL CSVLVVLSEE  360
AAKTIAESNK ANEKRADDGG ENQQASTQDR FQSQDDSDVK TVPDGSVSGN QTDRIVPDDS  420
NLDGNDQPKS RPMSPLTLAL RCDEQDTMFM AAGSPSRLGN HVHASSSQCS EQSTSEVYAE  480
QERIVMTKFR DSLNSLITFG ELRETKLSSL ARSNYTSFQE TGNGTAKLRT DGQNQQDHNN  540
GVAKPVITAP IKTPAMIAAT ITAIPSNNHI SQNPPLTENG DVKPSI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-176	CPP family protein