PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010785-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 387aa MW: 44399.4 Da PI: 5.3545

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010785-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52	2.3e-16	62	150	2	88
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 Yn+YA + GF +rk++ +++ +++++ +r +vCs g+++e+k+ ++++ ++ + rtgCka+++ +k +g ++v + HnH+ AUR62010785-RA 62 LYNSYAFKHGFGIRKDRLNRRdDKDRTPRQRFLVCSFVGFKQEKKHGEQSKVYQKRNFRTGCKAHIQFDIDKvSGLYVVVNHTMVHNHS 150 7*************99888456666677778**********999999**************99*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKFDEEAY 60 DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFVG FKQEKKHGEQ SKVYQKRNFR 120 TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVVVSKRHLI RSHRKVTNEQ VVMMSSLTES 180 SIPVADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSSEY 240 DFFYDFDVDE KGHLQSFFFR DNRMKVDYDA FAQNDLSARA VIEEAIEECT ARINLLMGED 300 KDVPPELSKT NEQDVTQEKG DGSLLEPAVI FEELAEEHGG LEKEHGGFER EHGGIVKEHT 360 VQDFLPVPDG NVLAHSNEFG GSLEFF*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKFDEEAY  60
DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFVG FKQEKKHGEQ SKVYQKRNFR  120
TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVVVSKRHLI RSHRKVTNEQ VVMMSSLTES  180
SIPVADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSSEY  240
DFFYDFDVDE KGHLQSFFFR DNRMKVDYDA FAQNDLSARA VIEEAIEECT ARINLLMGED  300
KDVPPELSKT NEQDVTQEKG DGSLLEPAVI FEELAEEHGG LEKEHGGFER EHGGIVKEHT  360
VQDFLPVPDG NVLAHSNEFG GSLEFF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-09	FAR1 family protein