PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010646-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 591aa    MW: 66257.8 Da    PI: 6.0813
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010646-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.99.4e-1252075731373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv+ L+ c+e ++s++  ++++++a+l e+asp+g +++ Rl+ayfteALa r++r +++++++  p+e ++ + ++ +aa++l++++sPi+kf 
  AUR62010646-RA 207 LVSFLMGCVEGIASRNVPAINHFIAKLGEQASPRGrSTIGRLTAYFTEALALRVTRLWPRIFHISVPRELDRFDDESGAAAFRLLNQISPIPKFI 301
                     5788*******************************8899********************************9999999***************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+taN+++l+a+eg+++vHiiDfd++qGlQWp ++q+La+R+++p ++RiTg+g+    sk+el etgerLa+fAe++++pfef++ v++rled+
  AUR62010646-RA 302 HFTANEMLLRAFEGKDKVHIIDFDVKQGLQWPGFFQSLATRRNPPSHVRITGIGE----SKQELVETGERLASFAEAFNLPFEFHP-VVDRLEDV 391
                     *******************************************************....***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l++L+vk+gE++a n++lqlh++l +  +   + ++++ +++s++P  +v++eqea+hn++++  r++++l+yysa+fds++++lp +s +r+k
  AUR62010646-RA 392 RLWMLHVKEGESVAANCILQLHKTLYDANNG--AFRDFMGIIRSTNPIALVMAEQEAEHNEPTLEMRVCNSLRYYSAIFDSIDSSLPFDSPARVK 484
                     *************************555444..4599********************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLvsvSaW 373
                     +E++ +gre +n+vaceg++r+erhe++++W++r+e+ GF+ ++ +e+++ q ++ll++++++ y+ve++ ++ + l W+d+pL+++S W
  AUR62010646-RA 485 IEEM-FGREMRNIVACEGSDRIERHEKFGNWKRRMEQEGFRGIRRDEREVFQSQMLLKMYSNERYNVEQQGDEGItLRWMDQPLYTISLW 573
                     ****.********************************************************999****88555555************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MLAGCSSTLL SPRHRLRSEA SACHYPLPSM STQRLDLPCN FSRKEVSVTR PPQIRAPVVG  60
LSVEKPIETK GLKQTIKVPP SPEGRREIKA EFWGEEERRV CFGAPTDVVS LPPLPPLSHN  120
PWIGSGITEI AEYGGEIEGE PSHGPVTTTT SGSSSSSESH SLGLRLNENV SEHEYGNGSM  180
NPNPGDGSRA VRTHNDDDQT EQQGFELVSF LMGCVEGIAS RNVPAINHFI AKLGEQASPR  240
GRSTIGRLTA YFTEALALRV TRLWPRIFHI SVPRELDRFD DESGAAAFRL LNQISPIPKF  300
IHFTANEMLL RAFEGKDKVH IIDFDVKQGL QWPGFFQSLA TRRNPPSHVR ITGIGESKQE  360
LVETGERLAS FAEAFNLPFE FHPVVDRLED VRLWMLHVKE GESVAANCIL QLHKTLYDAN  420
NGAFRDFMGI IRSTNPIALV MAEQEAEHNE PTLEMRVCNS LRYYSAIFDS IDSSLPFDSP  480
ARVKIEEMFG REMRNIVACE GSDRIERHEK FGNWKRRMEQ EGFRGIRRDE REVFQSQMLL  540
KMYSNERYNV EQQGDEGITL RWMDQPLYTI SLWGSVDAAA GSSSSFSQPI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein