PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010576-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 279aa MW: 31959.9 Da PI: 6.7988

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010576-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.6e-08	227	260	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + AUR62010576-RA 227 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 260 469*****************************87 PP
2	ELK	25.6	2.9e-09	181	202	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ AUR62010576-RA 181 ELKIELKQGFKSRIEDVREEIL 202 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGGEMAFSDQ YRQLKAEIAT HPLYEQLLAA HVACLRVATP IDQLPLIEAQ YNQSHNLLRS 60 YATNSQHNHS LSPHERQDLD NFLAQYLLVL CSFKEQLQNH VRVHAVEAVM ACREIEQNLQ 120 NLTGATLGEG SGATMSDDED DLQLEYSMDQ SSGGDAHDMM GFGPLLPTES ERSLMERVRH 180 ELKIELKQGF KSRIEDVREE ILRKRRAGKL PGDTTSVLKA WWQQHSKWPY PTEDDKAKLV 240 EETGLQLKQI NNWFINQRKR NWHNNSQSAN TLKSKRKR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	278	RKRNWHNNSQSANTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-166	TALE family protein