PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010371-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 289aa    MW: 32419 Da    PI: 9.5998
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010371-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind260.78.3e-802928815301
       GAGA_bind  15 epa..aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtks 107
                     +++  ++ + n++ +l+ ++aerda+++e ++al ekk+a+ er+ a  qr+ a++er++a++er+n++ +l+   +     +p + +v  gt+ 
  AUR62010371-RA  29 QHQikEQNALNMNRNLLNIMAERDAAVEEMKIALLEKKKALEERELAVSQRNLAIKERDEAITERNNAYHTLQNSMR-----EPLSPGVQCGTS- 117
                     222334455579*********************************************************99998444.....344433333443. PP

       GAGA_bind 108 idslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvs 202
                               +l+d ++ ++++++l+al  ++a++++ +k        ++++k+k++k+  +   k+ ++++ ++ + ++k++++ ++++ln v+
  AUR62010371-RA 118 ----------RLADLPFVTQQMQILDALC-RTAVPSECNK-------LPQTKKVKESKRCAR---KP-REKQISG-HLKVKNDWDGQNVGLNRVD 189
                     ..........4567777766676665554.4444333222.......222333333444433...22.2233333.3789*************** PP

       GAGA_bind 203 lDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkf 297
                     +D++ +P+P CsCtG+ rqCYkWGnGGWqS+CCttt+S yPLP +++++ aR++grKmS++af+klL+ La+eG+d+snpvDLkd W kHGtn++
  AUR62010371-RA 190 YDDTIMPAPGCSCTGVFRQCYKWGNGGWQSSCCTTTMSAYPLPPVPNKKFARLGGRKMSGSAFSKLLSGLASEGFDFSNPVDLKDRWSKHGTNRY 284
                     *********************************************************************************************** PP

       GAGA_bind 298 vtir 301
                     + i+
  AUR62010371-RA 285 ISIK 288
                     **98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDAGGQQGGA RHRCDNFRDH SPWNMIAYQH QIKEQNALNM NRNLLNIMAE RDAAVEEMKI  60
ALLEKKKALE ERELAVSQRN LAIKERDEAI TERNNAYHTL QNSMREPLSP GVQCGTSRLA  120
DLPFVTQQMQ ILDALCRTAV PSECNKLPQT KKVKESKRCA RKPREKQISG HLKVKNDWDG  180
QNVGLNRVDY DDTIMPAPGC SCTGVFRQCY KWGNGGWQSS CCTTTMSAYP LPPVPNKKFA  240
RLGGRKMSGS AFSKLLSGLA SEGFDFSNPV DLKDRWSKHG TNRYISIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.12e-86BBR-BPC family protein