PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010308-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 267aa    MW: 30049.4 Da    PI: 6.8923
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010308-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.7e-181661147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v ++G ++W+ I++ +  gR++k+c++rw + 
   AUR62010308-RA 16 KGPWSPEEDQLLRRLVDKHGARNWSVISKSIS-GRSGKSCRLRWCNQ 61
                     79******************************.***********985 PP
2Myb_DNA-binding54.72.3e-1770112347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++eEd+++v+a++++G++ W+tI+r ++ gRt++ +k++w++ 
   AUR62010308-RA  70 AFSAEEDDIIVRAHAKFGNK-WATISRLLN-GRTDNAIKNHWNST 112
                      79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDNLQTSSSM AADRIKGPWS PEEDQLLRRL VDKHGARNWS VISKSISGRS GKSCRLRWCN  60
QLSPEVEHRA FSAEEDDIIV RAHAKFGNKW ATISRLLNGR TDNAIKNHWN STLKRKFSSI  120
VAGDEVYRPE KRPEISHSSP PLSPSESDVS DSGVGFRSAV AEEKEKIEND PLTALTLSLP  180
GVEXXXXXXX XXPTSRIEAM TQEVNQKNDS VKETMSFGPE LMNVMQEMIR KEVRNYMAEA  240
EKSGVYFDGD IARNAVVERF YNGHFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-61MYB family protein