PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010071-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family M-type_MADS
Protein Properties Length: 74aa    MW: 8376.73 Da    PI: 10.8468
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010071-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF871.1e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeELS+LCdae+ +iifsstgkl+eys+
  AUR62010071-RA  9 KKIDNVTARQVTFSKRRRGLIKKAEELSTLCDAEIGLIIFSSTGKLFEYSN 59
                    68***********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MVRQRIQIKK IDNVTARQVT FSKRRRGLIK KAEELSTLCD AEIGLIIFSS TGKLFEYSNP  60
RSFSIPHSTI TYS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-29MIKC_MADS family protein