PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009774-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 570aa MW: 65596.9 Da PI: 7.0307

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009774-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.9	5.3e-26	28	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+l+vk++ +gkw+v+++++eHnHel p AUR62009774-RA 28 EFYKEYAKSLGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASLHVKRKPNGKWYVYNFVKEHNHELLP 114 6**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MEPNATMATS DVEPHEDMEF DSHEAAYEFY KEYAKSLGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASLH VKRKPNGKWY VYNFVKEHNH ELLPAQAHFF 120 RSHRDLDPLK NDVRLRRRKI LASVSKRFSA YQNVGCLDNL KRSQHAKGRS LSWTAEQFDK 180 IWLELLEKFE LQDDEWLRSM YDNRIRWVPL FMTGVSFAGL STRSRSECLN SFFDKYINAE 240 SSLRDFLEQY KLLLCDRFEE EAKAEFDAWH ETPDLKSPSP FEKQMSWVYT HEIFKRFQVE 300 VLGAAACHLK KEKEDETGIT YTVKDFENNQ DFIVEWNESR SEICCLCRMF EHHGYLCRHA 360 IVVLQMSGVF SIPSKYVLQR WTSAALSRHS ISGKLDEVQA KVRRYNDLCR RALILAEEGS 420 LSIESYNVAV SSIRDGFQQC GHVNGSLEKD LRPNSCLDYS TNCHEDGNQG IHSRLCDAEP 480 DIRLIETIAV PEIGSGNINV NNTRGRDPLD QNIAAVGPEH GFTQMETPNT RSAHLHNMFP 540 VPFNNGMPNM YQGPAPGQFH HAPWQEKHL*

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MEPNATMATS DVEPHEDMEF DSHEAAYEFY KEYAKSLGFG TAKLSSRRSR ASKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASLH VKRKPNGKWY VYNFVKEHNH ELLPAQAHFF  120
RSHRDLDPLK NDVRLRRRKI LASVSKRFSA YQNVGCLDNL KRSQHAKGRS LSWTAEQFDK  180
IWLELLEKFE LQDDEWLRSM YDNRIRWVPL FMTGVSFAGL STRSRSECLN SFFDKYINAE  240
SSLRDFLEQY KLLLCDRFEE EAKAEFDAWH ETPDLKSPSP FEKQMSWVYT HEIFKRFQVE  300
VLGAAACHLK KEKEDETGIT YTVKDFENNQ DFIVEWNESR SEICCLCRMF EHHGYLCRHA  360
IVVLQMSGVF SIPSKYVLQR WTSAALSRHS ISGKLDEVQA KVRRYNDLCR RALILAEEGS  420
LSIESYNVAV SSIRDGFQQC GHVNGSLEKD LRPNSCLDYS TNCHEDGNQG IHSRLCDAEP  480
DIRLIETIAV PEIGSGNINV NNTRGRDPLD QNIAAVGPEH GFTQMETPNT RSAHLHNMFP  540
VPFNNGMPNM YQGPAPGQFH HAPWQEKHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	1e-128	FAR1 family protein