PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009734-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 857aa MW: 94015.8 Da PI: 7.9857

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009734-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59	8.3e-19	325	425	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+l+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ AUR62009734-RA 325 FEKILSASDASRIGRLVLPKACAEAYfpTINQSEGLPLKIQDIKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGK 417 99************************666667778***********99899999999.*******************987.8999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++ +++ AUR62009734-RA 418 LVIGYRKA 425 99988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 857 aa Download sequence
MGSRICMNTS CGANSTVQWK KGWELKSGEI ADLCFNCGSS YEKSVYCDTF HPEETGWREC 60 SLCNKRLHCG CSASASLIEI QDFGGIWCIS CAESACCPPI RKDKFSGEAQ SSEKYSNAND 120 LQNNKPETNA ISNGNLFSLG NIIDTNIPRF LPQSPPALTN GPFGQIKPEA KNSSIGVAGL 180 GFSKFSHSLT GPTLCAPPNE DKANTGAKDV QESQMPSLNI SLRSPSETSN FGLTFSGGVE 240 EGDNSRSSLF QSGQRPRQIL PKPPKNNLAK VSDANKSSFS PMRVARPPAE GRLRNQLLPR 300 YWPRITDQEL QKLSGDLKTT IVPLFEKILS ASDASRIGRL VLPKACAEAY FPTINQSEGL 360 PLKIQDIKGN EWTFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGKLVI 420 GYRKASNTLE VQDTQTSSAN PNGVAPGESC YPDVADSLSA RNDRSGLQSM GGAKDNQPNV 480 LPEQSNLVSG NTSWGKSEKL KSKVKEDVLE QPKPSDKKKN AKHWFQKQEE PPVFGKKTLF 540 ATRRSGAQEQ WAQCDNCSKW RKLPTETYLP SRWTCSENFW DSTRALCTSP EETYPKELDN 600 LIKGSKESRK RKAAESPEQR CEPSGLDALA TAATLGDNDE PSAGATTRHP RHRPGCTCIV 660 CIQPPSGKGK HKPSCVCNVC LTVKRRFKTL MMRKKKRQCE REAEMAQQKS NELQVTGPQL 720 PKKAAANDVM LNKDNLENEV SQEKSQERMQ LDEGENSSKG HIDLNCHPIR EEDSTADAQP 780 SAGIMALAQA ASAPDMYIEP NGLANLLGKQ PMDTDSCLLL KTCDYVDKCL STKEEHHLSV 840 AKEQEQCKAD GVGSSK*

Sequence ? help Back to Top

Protein Sequence Length: 857 aa Download sequence

MGSRICMNTS CGANSTVQWK KGWELKSGEI ADLCFNCGSS YEKSVYCDTF HPEETGWREC  60
SLCNKRLHCG CSASASLIEI QDFGGIWCIS CAESACCPPI RKDKFSGEAQ SSEKYSNAND  120
LQNNKPETNA ISNGNLFSLG NIIDTNIPRF LPQSPPALTN GPFGQIKPEA KNSSIGVAGL  180
GFSKFSHSLT GPTLCAPPNE DKANTGAKDV QESQMPSLNI SLRSPSETSN FGLTFSGGVE  240
EGDNSRSSLF QSGQRPRQIL PKPPKNNLAK VSDANKSSFS PMRVARPPAE GRLRNQLLPR  300
YWPRITDQEL QKLSGDLKTT IVPLFEKILS ASDASRIGRL VLPKACAEAY FPTINQSEGL  360
PLKIQDIKGN EWTFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGKLVI  420
GYRKASNTLE VQDTQTSSAN PNGVAPGESC YPDVADSLSA RNDRSGLQSM GGAKDNQPNV  480
LPEQSNLVSG NTSWGKSEKL KSKVKEDVLE QPKPSDKKKN AKHWFQKQEE PPVFGKKTLF  540
ATRRSGAQEQ WAQCDNCSKW RKLPTETYLP SRWTCSENFW DSTRALCTSP EETYPKELDN  600
LIKGSKESRK RKAAESPEQR CEPSGLDALA TAATLGDNDE PSAGATTRHP RHRPGCTCIV  660
CIQPPSGKGK HKPSCVCNVC LTVKRRFKTL MMRKKKRQCE REAEMAQQKS NELQVTGPQL  720
PKKAAANDVM LNKDNLENEV SQEKSQERMQ LDEGENSSKG HIDLNCHPIR EEDSTADAQP  780
SAGIMALAQA ASAPDMYIEP NGLANLLGKQ PMDTDSCLLL KTCDYVDKCL STKEEHHLSV  840
AKEQEQCKAD GVGSSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	684	695	KRRFKTLMMRKK
2	684	697	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein