PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009556-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 757aa    MW: 84422.6 Da    PI: 5.5519
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009556-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.62.5e-1073837531373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+  +s+d + a++lL+++++++s  gd  qRla+yf++AL+arla+++s++y a ++++ts    ++ l+a+++f  ++P+ k+s 
  AUR62009556-RA 383 LRTLLTLCAQSTASDDRRTADELLKQIRQHSSAGGDGSQRLAHYFANALEARLAGTGSQIYTAQSSTKTS---AADMLKAYQFFIRTCPLKKISI 474
                     5789*********************************************************877777776...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN++I +a+e+++++HiiDf+i +G+QWpaL+q L++R++gpp+l iTg++ p++g   +e++e+tg+rLak++e+++vpfe+++ +a+++e+
  AUR62009556-RA 475 GFANHTIIKAAEKASKLHIIDFGILYGFQWPALIQGLSNRDGGPPKLCITGIDLPQPGfrPAERVEATGRRLAKYCERFNVPFEYHA-IAQKWET 568
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++ ++a+n+ ++ ++llde+  ++s+r++vLklv++++P+v+v    + ++n++ F++rf eal ++s+lfd+++++++re+ er 
  AUR62009556-RA 569 IRVEDLKIESDGVVAINCLYRFKYLLDETIVVDSPRSAVLKLVRNIKPNVFVQGVVNGSYNAPFFVTRFREALFHFSTLFDMFDTNASREDPERL 663
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + E+e+ grei+nvvaceg+er+er et+++W++r  +aGF++++l+++  +  ++ ++ ++ + + ++ + ++ + gWk+r   +++aW
  AUR62009556-RA 664 MFEKEFYGREIMNVVACEGTERVERPETYKQWQARNIRAGFRQMALDQELINMLRCKVKGHYHRDFVIDVDGQWTLHGWKGRITRAITAW 753
                     **************************************************************999************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MGSQYGEISD SFVSEIGNQP VNGMMSPDYD ESLNYANLFN YKDPSQDLSS LNLLNPLANP  60
DALNFSSFSV ASQGGVELSD DSDSDDVLKY ISQMLMEEDM EQKPCMFHDP LALQATEKPF  120
YDALGQKYPS SPNQHPLIDH GVDSPDDRPW SSSTDTSGST CTSSSNSTNF VETTMVTDLS  180
DHSKPLVTQS HPIRSYSQPS TLPQWSFSSS SSFGGSISNG STLSAFGLPV DMNFFSEKES  240
IIQFQKGMEE ASKFLPKNNN IVIDLDNINF PNESKHDASA VVVKKEKDEN SPDGSRTSKV  300
HYREDEDPDE GRRSSKQTAV SIDEAELSEM FDKVLLCHNP GQSCGINKDS EKSLPSPASQ  360
PQGPEVGKVR PRKQGNIKST VDLRTLLTLC AQSTASDDRR TADELLKQIR QHSSAGGDGS  420
QRLAHYFANA LEARLAGTGS QIYTAQSSTK TSAADMLKAY QFFIRTCPLK KISIGFANHT  480
IIKAAEKASK LHIIDFGILY GFQWPALIQG LSNRDGGPPK LCITGIDLPQ PGFRPAERVE  540
ATGRRLAKYC ERFNVPFEYH AIAQKWETIR VEDLKIESDG VVAINCLYRF KYLLDETIVV  600
DSPRSAVLKL VRNIKPNVFV QGVVNGSYNA PFFVTRFREA LFHFSTLFDM FDTNASREDP  660
ERLMFEKEFY GREIMNVVAC EGTERVERPE TYKQWQARNI RAGFRQMALD QELINMLRCK  720
VKGHYHRDFV IDVDGQWTLH GWKGRITRAI TAWVPA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein