PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009552-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 689aa    MW: 77660.4 Da    PI: 5.1171
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009552-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.87.1e-1133156861374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+avss dl+la++lL+++++ +sp+gd++qR+a++++ +L+arla+++s+++  +   + s   ss+ l+a++l++ + P+ ++s+
  AUR62009552-RA 315 LRNLLVQCAQAVSSFDLRLANELLKQIRQYSSPYGDSIQRIAHHVATGLEARLAGTGSTISTDICDMKIS---SSDFLKAYRLYVSAIPFKRMSY 406
                     689****************************************************999999888777776...8********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN++I + +e+++++HiiDf+i  GlQWp+++qaL++Rp+gpp+lRiTg++ p++g   ++++++tg+rL+ ++e++gvpf+++  +a+++e+
  AUR62009552-RA 407 FLANNTIKKLTEKATKIHIIDFGIFLGLQWPCFIQALSKRPGGPPELRITGIDFPQQGfrPADRVNATGRRLSGYCERFGVPFKYQG-IAEKWEN 500
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++++E+++Vn++++  +llde+v+ +s++d++L+l+ks++P+++++   +   +++ F +rf eal +ys+ f+ ++a+lpr+++er 
  AUR62009552-RA 501 IKLEDLKIESDEMVIVNCMFRSGTLLDETVEPNSPKDAFLRLIKSMNPDLFIHGIVNGTFTAPFFINRFKEALFHYSSAFEVFDATLPRDAHERL 595
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E e+ g+eivnvvacegaer++r et++kW+er  +aG+++vpl+ + +++ k++++  + + + v+e+++++++gWk+r   ++S+W+
  AUR62009552-RA 596 LIESEMYGKEIVNVVACEGAERVQRPETYKKWQERALRAGLRQVPLDREFVSKTKAMVKANYLKDFLVDEDRHWMLQGWKGRIFCALSFWK 686
                     **************************************************************777*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    
MNSVLVDSDL MNSAFKFYPA EMGSIYLKNP TFGDFFQTPE IVEPQTLEYE ENESKISLEA  60
PDSIDLDTLS IDQNESNSRC LKIPDFPDHC LKFISDILLE EDLDEKPASE QEHWALQATE  120
KSLYDALGES YPFQNQYPPS SHYSPSSPDP NTISLDDSSS GKSFSSFESN LSHTQPQLDL  180
NVDDFVQSFL ELNPQSSGSS SDDGDDGVVN DVVFPKKPLS TAPKKGEKPV KGSRRKKSRQ  240
RDDGDHEGGR SNKLHAASSE DYAELEQYDD ILLCSENKEE DASLSPKECL STTKGHGSRG  300
ARGKKQSIKV DEVDLRNLLV QCAQAVSSFD LRLANELLKQ IRQYSSPYGD SIQRIAHHVA  360
TGLEARLAGT GSTISTDICD MKISSSDFLK AYRLYVSAIP FKRMSYFLAN NTIKKLTEKA  420
TKIHIIDFGI FLGLQWPCFI QALSKRPGGP PELRITGIDF PQQGFRPADR VNATGRRLSG  480
YCERFGVPFK YQGIAEKWEN IKLEDLKIES DEMVIVNCMF RSGTLLDETV EPNSPKDAFL  540
RLIKSMNPDL FIHGIVNGTF TAPFFINRFK EALFHYSSAF EVFDATLPRD AHERLLIESE  600
MYGKEIVNVV ACEGAERVQR PETYKKWQER ALRAGLRQVP LDREFVSKTK AMVKANYLKD  660
FLVDEDRHWM LQGWKGRIFC ALSFWKPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-158GRAS family protein