PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009551-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 680aa    MW: 76337.8 Da    PI: 5.5983
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009551-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.61e-1133066771374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+s dl+ a++ L+++++++sp+gd++qRla+yf+++L+arla+++s++++ +   + s   ss  l+a+++++ + P  ++s+
  AUR62009551-RA 306 LRTLLTQCAQAVASFDLRSANERLKQIRQHSSPYGDNIQRLAHYFANGLEARLAGTGSTMSANIVDARIS---SSGFLKAYRAYVTAVPAKRMSF 397
                     6789***************************************************999999888777776...899******************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN++Il+ +e+++++HiiDf++  GlQWp+L+q La+Rp+gpp+lRiTg++ p++g   +e++e+tg+rLa ++e+++vpf+++  +a+++++
  AUR62009551-RA 398 FLANNTILKLAEKATTIHIIDFGVLLGLQWPCLIQNLAKRPGGPPKLRITGIDYPQQGfrPAERVEATGRRLAGYCERFDVPFQYQS-IAQKWNT 491
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+ +++ +E ++Vn++++  +llde+v+ +s++d++Lklvk+++P+++++   +  +n++ F +rf eal +ysa+fd +e++lpr+++er 
  AUR62009551-RA 492 IRLEDVKIRGDELVIVNCMFRSVSLLDETVEADSQKDAFLKLVKQINPRLFIHGVVNGTYNAPFFITRFREALFHYSAIFDVFEETLPRDDHERL 586
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      vE e+ g+e+ nv+aceg er++r et+++W+ r  +aGFk++pl+++ +  ak++++  + + + v+e+++++++gWk+r++  +S W+
  AUR62009551-RA 587 LVESEVYGKEAFNVIACEGVERTHRPETYKQWQVRTVRAGFKQLPLDKELVGRAKAMVKANYHKDFVVDEDRNWMLQGWKGRTICGLSIWQ 677
                     **************************************************************888*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    
MYPVLVDPEL VSHEFKFNPD LISNINTHQN FGNTHQNFGN GITQGEIFGN DDLVDQKPPL  60
VDYNKNFISS DIPDFSDACL KFLSDILLEE NLDEIPATVQ DYRALQATEK SLYDALGEEY  120
SPSDKPTSCL DQSIENPDDV LGRCWDNSFG VESNWVQSQT PSEPFLSLDD LSQSFLELNS  180
QSSGSSNSDD CKDGAATSPT STISSLAPEK GDKVVSKPRR KKNHQRDDGS YGGGRSNKQQ  240
ASSNEDYVEM KQYDDILLCK EDKDGLAVGN KESSATDVSK KMQEKGVKGK TTRGKKQDII  300
GEEVDLRTLL TQCAQAVASF DLRSANERLK QIRQHSSPYG DNIQRLAHYF ANGLEARLAG  360
TGSTMSANIV DARISSSGFL KAYRAYVTAV PAKRMSFFLA NNTILKLAEK ATTIHIIDFG  420
VLLGLQWPCL IQNLAKRPGG PPKLRITGID YPQQGFRPAE RVEATGRRLA GYCERFDVPF  480
QYQSIAQKWN TIRLEDVKIR GDELVIVNCM FRSVSLLDET VEADSQKDAF LKLVKQINPR  540
LFIHGVVNGT YNAPFFITRF REALFHYSAI FDVFEETLPR DDHERLLVES EVYGKEAFNV  600
IACEGVERTH RPETYKQWQV RTVRAGFKQL PLDKELVGRA KAMVKANYHK DFVVDEDRNW  660
MLQGWKGRTI CGLSIWQTC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-172GRAS family protein