PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009533-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 272aa    MW: 30875.7 Da    PI: 5.8991
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009533-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.23.4e-16451052686
        trihelix  26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +p+W  +s +++++g++r+p qC+++w+nl ++++k+k++e+k  +++ s +++ ++l+
  AUR62009533-RA  45 NTEPKWVMISCYCKQQGVKRGPAQCRKRWSNLIGDFRKVKNWESKLVNKADSFWSMRNDLR 105
                     6789******************************************999999999999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MFHMNMAKEI TENSPHKGRK ISSALLGNAE AGSSSASSPS LLFDNTEPKW VMISCYCKQQ  60
GVKRGPAQCR KRWSNLIGDF RKVKNWESKL VNKADSFWSM RNDLRKEKKL PVSFDVEVFK  120
EGGDDEEDEK MQDGGEVLSD FKDKEQETLA LTGKSEDDKF ADNMTEEPVK NFCIPEPISD  180
TPKESRPNFS NWDSQGKGKR LRLSTDECTT NCSEAQILKV LEENNRLLNA QLESHNKNCQ  240
LEREQRKQNN NELMSTLSKL TDVLSKIAEK L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-44Trihelix family protein