PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009388-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 340aa    MW: 36671.5 Da    PI: 9.3987
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009388-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.4e-32172228158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k+rkpylheSRh hAlrR+Rg gGrF
  AUR62009388-RA 172 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKARKPYLHESRHVHALRRARGAGGRF 228
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MPSNAGNVED RFQVDGGGKP QNMLFGQPWW RGLNNNGVSP TSASNDSSTR SSSGEPVNGS  60
SLAGPFSLQI NGMQDTGASV YREIHTALAP QSEAERDNTQ ETKQVPSSMP QNLGDQSNPQ  120
MEFVGHSIAM TSYPFQDPTY AGAMSYAQVQ QVIPQLYGLH QSRMPLPLAM EEEPVYVNAK  180
QYHGILRRRQ SRAKAELEKK VIKARKPYLH ESRHVHALRR ARGAGGRFLN TKKLDGNDAN  240
NAASKANANT ATNLQICSSG SARAEHLSTT YCANAGSSWN QQESRGLMIS DIHKADSHSS  300
GSTNVHGLSS TYLSFSGANE ERNNYGQGGM KVNGAVSVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-35NF-YA family protein