PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009197-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 318aa    MW: 36081.2 Da    PI: 5.0933
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009197-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.41.2e-18134236290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                      Y+++A  +GFs+rk++++ +++++ + ++++vCs egkr++ +kk              ++++ r+ + tr +Cka+++ k +k+g++ev   +
  AUR62009197-RA 134 LYEKHAAILGFSIRKHTTRFKQHTKIVAEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHV 228
                     7*****************************************99999***********887888888899************************* PP

            FAR1  83 leHnHela 90 
                      +HnHel+
  AUR62009197-RA 229 IQHNHELT 236
                     ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DAIDNADEAI ENAEDAIHNA ENQVVPDKSI DSNSEQTTKS DATEDTNPID AYGLDLRGSF  120
VGVVRETFEE ILELYEKHAA ILGFSIRKHT TRFKQHTKIV AEKNYVCSAE GKRHSGQKKT  180
KLVEMVDEED VNVKTRKPRQ VSITRSNCKA CIRAKVNKEG QFEVVAHVIQ HNHELTKPQW  240
HYLHRSERKM TEEKVVTIKT MKSSGLITMD TYNYMAIEAG GEQNIGHSVV DHLNFCSRLR  300
KEQIEAGDAQ TLVNILS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-17FAR1 family protein