PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009161-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 561aa MW: 62922.1 Da PI: 6.7528

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009161-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25	3.3e-08	475	512	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 F + ++yp+ +e+ LA k gLt +qV++WF N R + AUR62009161-RA 475 FDNflHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVR 512 555558******************************88 PP
2	BELL	72.8	5.8e-24	353	418	6	72
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +k++++l ll++Vd+rY+++ +++++vis+F+a+++l++ +++ +Al++iS+ +++L+++i++qi AUR62009161-RA 353 SSKRSQMLALLQMVDDRYNRCLDEIHMVISAFHAATELDP-QLHSCFALQTISFFYKNLRERISNQI 418 6899**********************************.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MDSEPHMQLD LPSCIPTVID GMPQSLSESQ FRTAFYQLHS QNDSMLGLPL LPSFQGQSFK 60 DMHADKTVCF DGLINRGNFN YEERCLGDAS FTSGSLPTIL ASRNGFNNDA NNSIISLQQE 120 VPSESLRAMF SGGCSYASSS SIPTTLNSGY DGSFGDVNDK WDHNRFLMQQ EMNWRPSTSE 180 LEPIRFNGSQ VANNEWVLPS STHVCTSHPY GTSRSHNELS LSLATCEPSL PSDLSCSGVI 240 NSSQSQTRLG SEHKSHRSKE LSLGSTSKNR PVQFPPVTPG SRYVSVMQQI LSEISSYSLD 300 SLDKNSYNGD KSLVNSSSSH PFSSNNFFDP GASFKNTNEF HDNDGLFEVP AGSSKRSQML 360 ALLQMVDDRY NRCLDEIHMV ISAFHAATEL DPQLHSCFAL QTISFFYKNL RERISNQILA 420 MGMDNGNARE SGITIDKSFI HKQWAIQQLK RKDQLWRPQR GLPERSVSVL RAWMFDNFLH 480 PYPKDAEKHL LAIKSGLTRS QVSNWFINAR VRLWKPLVED MCAEIKKKKG SQQNDEGTSN 540 SSNNNRSQLR IYDYDQRFSN *

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MDSEPHMQLD LPSCIPTVID GMPQSLSESQ FRTAFYQLHS QNDSMLGLPL LPSFQGQSFK  60
DMHADKTVCF DGLINRGNFN YEERCLGDAS FTSGSLPTIL ASRNGFNNDA NNSIISLQQE  120
VPSESLRAMF SGGCSYASSS SIPTTLNSGY DGSFGDVNDK WDHNRFLMQQ EMNWRPSTSE  180
LEPIRFNGSQ VANNEWVLPS STHVCTSHPY GTSRSHNELS LSLATCEPSL PSDLSCSGVI  240
NSSQSQTRLG SEHKSHRSKE LSLGSTSKNR PVQFPPVTPG SRYVSVMQQI LSEISSYSLD  300
SLDKNSYNGD KSLVNSSSSH PFSSNNFFDP GASFKNTNEF HDNDGLFEVP AGSSKRSQML  360
ALLQMVDDRY NRCLDEIHMV ISAFHAATEL DPQLHSCFAL QTISFFYKNL RERISNQILA  420
MGMDNGNARE SGITIDKSFI HKQWAIQQLK RKDQLWRPQR GLPERSVSVL RAWMFDNFLH  480
PYPKDAEKHL LAIKSGLTRS QVSNWFINAR VRLWKPLVED MCAEIKKKKG SQQNDEGTSN  540
SSNNNRSQLR IYDYDQRFSN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	5e-96	TALE family protein