PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009109-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 261aa    MW: 28979.2 Da    PI: 6.2436
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009109-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS227.65.7e-701244120374
            GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak..rledleleeLrvkpgEalaVnlvlqlhr 212
                     +qGlQWp L++ LasR+++  s+R+Tg+g+    s+e l++tg+rLa+fA++lg+pf+fn++  k  ++++lel +++++ +Ea++V++++  h+
  AUR62009109-RA   1 MQGLQWPGLFHILASRSKKVSSVRLTGFGP----SSELLNQTGSRLAEFAASLGLPFKFNPIEGKfgDMSELELTRIDLRANEATVVHCMH--HN 89 
                     69****************************....9**************************96666699*********************9..99 PP

            GRAS 213 lldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerr 306
                     l+d  +s       +L+++  ++Pk+v++v q+++  +++sFlerf+e+l+yysa+fd+l ++l+r++  r+ vE++l+g ei+n++ac      
  AUR62009109-RA  90 LYDMIGSNFG----MLRVLSIVKPKLVTMVTQNIEIfETGSFLERFIETLHYYSAMFDALGEGLSRDNVLRHQVEQQLFGSEIRNILACDDVG-- 178
                     9966666666....*****************************************************************************99.. PP

            GRAS 307 erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                         ++++W + l+++GF+pv+ls + a+qa+lll++++++gy++ ee+g+l lgWk+ pL+++SaW+
  AUR62009109-RA 179 --GVSVSRWGDELSRFGFEPVSLSGSPAAQASLLLEMFPWKGYTLMEENGCLRLGWKGMPLLTASAWQ 244
                     ..88899************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MQGLQWPGLF HILASRSKKV SSVRLTGFGP SSELLNQTGS RLAEFAASLG LPFKFNPIEG  60
KFGDMSELEL TRIDLRANEA TVVHCMHHNL YDMIGSNFGM LRVLSIVKPK LVTMVTQNIE  120
IFETGSFLER FIETLHYYSA MFDALGEGLS RDNVLRHQVE QQLFGSEIRN ILACDDVGGV  180
SVSRWGDELS RFGFEPVSLS GSPAAQASLL LEMFPWKGYT LMEENGCLRL GWKGMPLLTA  240
SAWQPSNYSC VTNNSNIMRN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.12e-95GRAS family protein