PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009104-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 164aa MW: 18750.4 Da PI: 5.7573

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009104-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	102	160	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YYrC+ +Cpvkk+ver+++d k+v++tYeg+H h+ AUR62009104-RA 102 VDDGYKWRKYGKKMVKNSPNPRNYYRCAVDSCPVKKRVERDRDDMKYVITTYEGNHIHD 160 59*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MTTTTNTFSS LESSGSDHFF EQSTDFEVSD FFSFEGWGNE QQSMDFGSQG TQNYGYQGTE 60 FYDIGGSSNI QNEGENSKGS VRNGKEKKER VAFRMKSEID VVDDGYKWRK YGKKMVKNSP 120 NPRNYYRCAV DSCPVKKRVE RDRDDMKYVI TTYEGNHIHD APK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	1e-39	WRKY family protein