PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008862-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 328aa MW: 37823.6 Da PI: 6.3616

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008862-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.9	7.9e-09	151	209	46	90
FAR1 46 kk..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kk ++++ r+ a tr +Cka+++ k +k+gk+ev + +HnHel+ AUR62008862-RA 151 KKtklveiineedvnvKTRKLRQVAITRSNCKACIRAKVNKEGKFEVVARVIQHNHELT 209 3345555666666655778888999********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MLHASPVLET ISFQELNDYW NDKVLQEVDD WNKSETIPSC LESHLKRIEI MHHPRAKWVQ 60 AFVTYFLRYA LVLEELVVIM RREETKSFGD EFVPIFNNPN NGDDAGEVIN NAEEAIENAE 120 NQVVPGKSID SNSEQTTKSN ATEGKRNSGY KKTKLVEIIN EEDVNVKTRK LRQVAITRSN 180 CKACIRAKVN KEGKFEVVAR VIQHNHELTR SQWHYLHRSE RKMTEEKAEA IKTMKSSGLT 240 TMDTYNYMAT EAGGEQNVGH SAVDHLNFCS RLRMEQIEAG DAQTLVNILN QEQSKDPNFF 300 FRVKFDKEGR ISNIFRRDSM MLEDYRI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-20	FAR1 family protein