PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008711-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 303aa    MW: 34076.5 Da    PI: 4.9839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008711-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.6e-2070120155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+G+r+++ +g+W+AeIrdp++     r++lg+f t+eeAa+a+++ ++k++g
  AUR62008711-RA  70 TQYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDKEARKIRG 120
                     58********.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MCGGAILADL IPRNKGRFNS GSDFWPSNFI STSSDNFTKQ VSYRPPKRPL SSSSGGSVQQ  60
EKRPKKQRKT QYRGIRQRPW GKWAAEIRDP RKGVRVWLGT FNTPEEAARA YDKEARKIRG  120
KKAKVNFPNE DEQHLTNNVP LNNYDYNYNP RSFQTQQQQQ FNNCVSESQT IDYMSFDYLN  180
GNQQFSSDGL ESSIERSTGY GLESAYNASN LVSNTTTLDS DEVVPVPKAE IAVVGEEEEN  240
EVKKLSEELM AYENYMKFYE IPYLDGQSAT VQPSLGGCQE GNATLELWNF DDDATVLSAA  300
ST*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.14e-39ERF family protein