PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008486-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 353aa    MW: 37731.5 Da    PI: 6.735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008486-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.19.7e-061461881755
                     HHHHHHHHCTSCC.C......TTS-STCHHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPk.as...kapskKlsKaeiLekAveYIksLq 55 
                     N af++ r+  Pk  s   + ++ K +Ka++L +++eY+k+Lq
  AUR62008486-RA 146 NAAFSKKRSYQPKdESsaeASSKCKQDKASMLDEVIEYLKQLQ 188
                     6777777888888555887778889*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
ANFEVAELTW ENGQLAMHEL GGIFQAPTTA PSKGTWNGGV GRVTDTLESI VHQATYCNSK  60
QSPNLMTASA SHQQSGIQNM ENVGSSVVAS SGGKWAENSG HIQTPVGPLP PPPPGLMKKR  120
TRSESENCAA RNNTNDHEMS ACASANAAFS KKRSYQPKDE SSAEASSKCK QDKASMLDEV  180
IEYLKQLQAQ VQMMTNARFM PQIMMPLGMQ QHFHQMSLLA RVGMGAGLGM GMGMLDTTSM  240
GASHPAPQSM PSMIHPTQVG TATSAFVPPA FVVPQMIPAS SQQANPADPG TSCSAPLQDP  300
YSTLLAQAIY EHRSLQQDGS FTEATTDIVT TNKQSVTFQP SHSTELRRLF MI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.11e-08bHLH family protein