PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008425-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 451aa MW: 49646.1 Da PI: 4.933

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008425-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.4	8.4e-40	107	167	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s AUR62008425-RA 107 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKSSA 167 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MMDPAIKLFG KTIPVIGDNE SPRYDSNESS NSDLHDVDDK ESTEDAMEIE QSDDPAPPPE 60 EDSTNPPIMS DTNDNEKAPD SEKESEEMDE KESDDQKSSQ QKTLKKPDKI LPCPRCNSMD 120 TKFCYYNNYN VNQPRHFCKS CQRYWTAGGT MRNVPVGAGR RKNKSSASRY CHITVSEALQ 180 AARLDVPNGV HHPGLKTNGT VLTFGPDNPL CESMLNIADK KVLNGTTATP RNGFHNMDQV 240 VCRSKENGDD RSSGSTVTTT SSMDEKATAG QQGQIKPNLN GFTNQMPCYQ WPYMWNPAVP 300 VPPFFPSAFP MSFYPPPPYW NGAMPWNFPW VSPCPPGQKS PESNPNSPTL GKHSRDGEML 360 NQSENEKSIG TPTVLVPKTL RIDDPDEAAN SSIWSTLGIK KGDSVSKGGG FFNTLQSKKK 420 DDDLHNIDVP PALQANPAAL CRSMNFQESA *

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MMDPAIKLFG KTIPVIGDNE SPRYDSNESS NSDLHDVDDK ESTEDAMEIE QSDDPAPPPE  60
EDSTNPPIMS DTNDNEKAPD SEKESEEMDE KESDDQKSSQ QKTLKKPDKI LPCPRCNSMD  120
TKFCYYNNYN VNQPRHFCKS CQRYWTAGGT MRNVPVGAGR RKNKSSASRY CHITVSEALQ  180
AARLDVPNGV HHPGLKTNGT VLTFGPDNPL CESMLNIADK KVLNGTTATP RNGFHNMDQV  240
VCRSKENGDD RSSGSTVTTT SSMDEKATAG QQGQIKPNLN GFTNQMPCYQ WPYMWNPAVP  300
VPPFFPSAFP MSFYPPPPYW NGAMPWNFPW VSPCPPGQKS PESNPNSPTL GKHSRDGEML  360
NQSENEKSIG TPTVLVPKTL RIDDPDEAAN SSIWSTLGIK KGDSVSKGGG FFNTLQSKKK  420
DDDLHNIDVP PALQANPAAL CRSMNFQESA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-92	Dof family protein