PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007865-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 413aa    MW: 45412.6 Da    PI: 6.3802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007865-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12e-051471791955
                     HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +f+ Lr+l+P+     ++K + a+ L +++eY++ Lq
  AUR62007865-RA 147 RFQILRDLIPHG----DQKRDTASFLLEVIEYVQLLQ 179
                     79*********7....79****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MKSSKGNSPE DDEEYDEDFS SKKEASSSNK DSKNNDKASA MRSKHSVTEQ RRRSKINERQ  60
MFSCQKKVVN FGSVEEAGHT VLTLAAISGA YRSDISIFVN LKKCSYKAGS MGLDFSSTKP  120
GALLLVLLVL YVEFIKKLMQ CDIVTYRFQI LRDLIPHGDQ KRDTASFLLE VIEYVQLLQE  180
KVQKYEGPYQ GWSTEPTKLM PWRHSHWRVQ SFLGHPQAVK NGPGSASTFS GNFDERSLNS  240
NSSMTANAQN PVDADSGHEA YRALDQQSEL VEKTAPMPTS FPLHMPTVVQ SDGDDSHLSQ  300
RPASDGLPAP CPNNCDEQGE YTIEGGTINI SNSYSHGLLM TLTQALQSSG VDLSQANISI  360
RIDLGKRANE SQAPGLSGAK DLENSVSHDL NMGHAGGESR ENLEQPQKKL KS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-68bHLH family protein