PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007059-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 354aa    MW: 39538.2 Da    PI: 5.666
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007059-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.2e-13175222254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ah e+E++RR ++N++f  Lr ++P        K++Ka+ L  Av YI++L
  AUR62007059-RA 175 KAAHVEAEKQRRYKLNQRFYALRAVVPYV-----SKMDKASLLSDAVTYINEL 222
                     789*************************6.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MSFKQRLQTI VESKQGLLYA MLWQMTPGVE NIMTTAASSS ISSRRVLACS DGYLRSYSIR  60
SSLNEEIVMM SDAEWFYADS IGKELVIEDN YNLVIGEAMS SGSYLWLIDS SGCERAREAL  120
QHYVRTLVFV PVASGGIIEI GSLDEIKEDR SLIELAFSIF NGNGSSVACS RGDSKAAHVE  180
AEKQRRYKLN QRFYALRAVV PYVSKMDKAS LLSDAVTYIN ELKSAVKNLE EKLQELPSVS  240
TSVSTTTNNF SPHLHALLLH HPTTKGWPIE IEVEVKSIGK EVVIRVQTTG LDHPEARIMN  300
VLKELRLEIC YATISHVNEV VFQNIIAKMP LYPDELITTQ ESLTNAIRES LQY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.17e-38bHLH family protein