PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006830-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 657aa MW: 76298.8 Da PI: 8.5359

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006830-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.1	1.2e-07	10	52	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++++ r+ + tr +Cka+++ k +k+g++ev + +HnHel+ AUR62006830-RA 10 KTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELT 52 4677788899*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH 60 RSERKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN VGHSVVDHLN FCSRLRMEQI 120 EAGDSQTLVN ILSQEQSEDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT 180 YRTNRYNLIC APFVGINNHW HNCMFACAFI GDETTDSFVW LLQTFFKAME DRKPTSIFTD 240 QDQAMANAIL EVIPNTRHRL CIWHLEQNVI TRFGALKKDK EFKFAFNQCL KMCVTEQEFE 300 AKWQAMLQKY ELTEHSWYKR VYELKDKWCP ALCRDFFSAG ILSSQRSEST NHAIGFRASK 360 ATTLTEFYTI FKKTTNRWRS TEKYDEFTCS KSIAFTSLPL SGMLKHAAQV FTLSLFRNFE 420 EEFGYSMATT VQMLGSNEEC LLYQVTLEDK SWSAHQVNYI QESQTVWCTC KNFEASGWLC 480 YHCIRILHLH SVTRIPDKYV SKRWTKFAKT EAWDRLKNQD PKQQYIPWRQ TMMRKYYNLI 540 LKSQENEETR AFMEESFRNS LKMVEDSLAS AAQKESAEAA SNIPDVADNT QSNTDASSAS 600 STSTCVPIIL DPKRAVTKGR SKRAKGGLEK SKRKRKPALP PPNSEFGSKT PNLRLF*

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH  60
RSERKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN VGHSVVDHLN FCSRLRMEQI  120
EAGDSQTLVN ILSQEQSEDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT  180
YRTNRYNLIC APFVGINNHW HNCMFACAFI GDETTDSFVW LLQTFFKAME DRKPTSIFTD  240
QDQAMANAIL EVIPNTRHRL CIWHLEQNVI TRFGALKKDK EFKFAFNQCL KMCVTEQEFE  300
AKWQAMLQKY ELTEHSWYKR VYELKDKWCP ALCRDFFSAG ILSSQRSEST NHAIGFRASK  360
ATTLTEFYTI FKKTTNRWRS TEKYDEFTCS KSIAFTSLPL SGMLKHAAQV FTLSLFRNFE  420
EEFGYSMATT VQMLGSNEEC LLYQVTLEDK SWSAHQVNYI QESQTVWCTC KNFEASGWLC  480
YHCIRILHLH SVTRIPDKYV SKRWTKFAKT EAWDRLKNQD PKQQYIPWRQ TMMRKYYNLI  540
LKSQENEETR AFMEESFRNS LKMVEDSLAS AAQKESAEAA SNIPDVADNT QSNTDASSAS  600
STSTCVPIIL DPKRAVTKGR SKRAKGGLEK SKRKRKPALP PPNSEFGSKT PNLRLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-95	FAR1 family protein