PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006655-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 756aa MW: 82708.6 Da PI: 5.2546

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006655-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.6	2.2e-32	300	357	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C vkkkvers+ d++++ei+Y++ Hnh+k AUR62006655-RA 300 EDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCLVKKKVERSH-DGQITEIIYKNAHNHPK 357 8**************************************.*************85 PP
2	WRKY	102.7	2e-32	515	572	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+vers++ +++ +tYeg+Hnhe AUR62006655-RA 515 EDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCTVRKHVERSSQSLRFILVTYEGKHNHE 572 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MLLMENSEEE LEEWRDIMMS SKGIFSGFGP EKCGCKSIDE FFNSGEGSFG CDDGAETSVE 60 NSLRFDNGSN SLMGVDDNSS VIKTGVSIAE RRANKRGFNA SKLCSPQVRT ISLLPHSSES 120 CSPYVTVSTN ISPRTLLESP MLLPNSQSEE DFYSEGLCAC IYGSAEIYWC DRTTLSDIYY 180 WHIVLIFLHI DETELHCLMP GKDIGEVLLL SPTTGSLASR PLDGDSQMLI SASSADADKG 240 SDGSSSALFK PHTETTSLSD FHDVNNQMLQ ENGSSMGDDS ALDGNQNGIY SHTGIARTAE 300 DGYNWRKYGQ KQVKGSEYPR SYYKCTYPNC LVKKKVERSH DGQITEIIYK NAHNHPKPQP 360 SRKSTSGALP FNETSDVGDG SGLCMKVNNG PVWRSIQSGC KDVTGSDWRI DGLETSPTSA 420 LTEVSDPLLT TQGKQMGVPG SAGTPEFSST LVSHEDDEED ATAQGCFLNE HEGENGSDLK 480 RRKKDGYFAE TTLGSRAVRE PRVVFEIETD VDILEDGYRW RKYGQKVVKG NPNPRSYYKC 540 TTPGCTVRKH VERSSQSLRF ILVTYEGKHN HEVPAARNSA HANSGSGSLT AAATSTQPSL 600 ALPRSSHLPK PEPHTPDLPL HFDTNIGCNN DIFRSSPAYY PIKFPGLPKT TPYGPFGLST 660 NHPAYANNMV PAIPELSFPP PLGFPCSITS CCNPDRSHPT VPSLYAGHKL DESDVKFLRP 720 KQEQKDDSFD TDMNSFDHTN ASSSTYNHVL GNFGS*

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MLLMENSEEE LEEWRDIMMS SKGIFSGFGP EKCGCKSIDE FFNSGEGSFG CDDGAETSVE  60
NSLRFDNGSN SLMGVDDNSS VIKTGVSIAE RRANKRGFNA SKLCSPQVRT ISLLPHSSES  120
CSPYVTVSTN ISPRTLLESP MLLPNSQSEE DFYSEGLCAC IYGSAEIYWC DRTTLSDIYY  180
WHIVLIFLHI DETELHCLMP GKDIGEVLLL SPTTGSLASR PLDGDSQMLI SASSADADKG  240
SDGSSSALFK PHTETTSLSD FHDVNNQMLQ ENGSSMGDDS ALDGNQNGIY SHTGIARTAE  300
DGYNWRKYGQ KQVKGSEYPR SYYKCTYPNC LVKKKVERSH DGQITEIIYK NAHNHPKPQP  360
SRKSTSGALP FNETSDVGDG SGLCMKVNNG PVWRSIQSGC KDVTGSDWRI DGLETSPTSA  420
LTEVSDPLLT TQGKQMGVPG SAGTPEFSST LVSHEDDEED ATAQGCFLNE HEGENGSDLK  480
RRKKDGYFAE TTLGSRAVRE PRVVFEIETD VDILEDGYRW RKYGQKVVKG NPNPRSYYKC  540
TTPGCTVRKH VERSSQSLRF ILVTYEGKHN HEVPAARNSA HANSGSGSLT AAATSTQPSL  600
ALPRSSHLPK PEPHTPDLPL HFDTNIGCNN DIFRSSPAYY PIKFPGLPKT TPYGPFGLST  660
NHPAYANNMV PAIPELSFPP PLGFPCSITS CCNPDRSHPT VPSLYAGHKL DESDVKFLRP  720
KQEQKDDSFD TDMNSFDHTN ASSSTYNHVL GNFGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	2e-86	WRKY family protein