PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006501-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Dof
Protein Properties Length: 305aa    MW: 33896.4 Da    PI: 7.9839
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006501-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.86.6e-403393363
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    e+a+kcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+r+nk+sss
  AUR62006501-RA 33 EQAMKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 93
                    7899*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MASQSLDSML MCTKPENGSQ QSQQEKKPRP ADEQAMKCPR CDSTNTKFCY YNNYSLTQPR  60
YFCKSCRRYW TKGGTLRNVP VGGGCRRNKR SSSMSKRGTS SSDCHLQVPE LMITNPTSSS  120
SQSLLSPLCS YDQTLALAHQ GNLSILGNHG NGHFDLFGNP SGNNNNSNFL DTLRSGLIEN  180
NSNHFLYYGH EGNGANFRDV RGTNNNVDVH HSHEDRHELA MNFVSHSNNR DIMSNASSGS  240
STPEIKHEFG GDNKILWGLP WQLNGERNYM MNGGNINEID TLKESWNSAI VGSTWNNLLN  300
SPLM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.11e-34Dof family protein