PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006079-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 269aa    MW: 31427.1 Da    PI: 5.8058
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006079-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.12.6e-26158207352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ++i  e+++kyF+lpi +AAkeL+v+lT+LK++CR+++IkRWPhRkiksl
  AUR62006079-RA 158 ESIGYEEIRKYFDLPISKAAKELNVGLTILKKRCRELNIKRWPHRKIKSL 207
                     67999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEIQCHDLQD WHFLEDWQQR LLFEESLLPP VFQDYLLDYP STNNQYLNNL ENLGTDFQLW  60
DECPPLCEDA WMKPLRQLPP LLPSSLPSMT KNPNPLPFDD AQFSLSDNIL NDQSLATVVA  120
EGLTMQKQGN KIVKVSNIVG DDENEEIRKN KATTTKIESI GYEEIRKYFD LPISKAAKEL  180
NVGLTILKKR CRELNIKRWP HRKIKSLEAL INSTKELGMV QMAERLEEDK RKLHFMPEFE  240
LTEETKRLRQ QCFKANYKKR RALALNYV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.13e-37Nin-like family protein