PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006018-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GRF

Protein Properties

Length: 274aa MW: 29953.2 Da PI: 5.0501

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006018-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	24.7	4.2e-08	72	87	1	16
WRC 1 daepgrCrRtDGKkWR 16 daepgrCrRtDGKkWR AUR62006018-RA 72 DAEPGRCRRTDGKKWR 87 79*************9 PP
2	QLQ	55.3	2e-19	4	34	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 +FTa+Q+ +L++Q+++yKy++a++PvPp+Ll AUR62006018-RA 4 PFTATQWKELERQAMIYKYMMASLPVPPDLL 34 8****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGFPFTATQW KELERQAMIY KYMMASLPVP PDLLYSSFPT NFSYPSTFSP ASYYMGKYGS 60 GISMRWSGNS KDAEPGRCRR TDGKKWRNLG WNDEQQWNQL VQTNMNSSVF QQQFEGEPLN 120 LNSQSGHNPT KSDELGLLER PLFDAWSIGM AGNNKNNGSS KLSLSSSNGG NSNVIDDEMC 180 QIHMGLGLID SWVSSSTTPG GPLAEVLRPG NMALSDVSEV EFVTPPATAV SSPSGVLQKT 240 LATFSDSSES NSPTTTTCHN SKANSDMPFH WLN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-20	GRF family protein