PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005874-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 314aa    MW: 35550.8 Da    PI: 6.0907
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005874-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.2e-12153199455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++ErrRRd++ ++f  L +++P       +K +K ++Le+A++Y+k+Lq
  AUR62005874-RA 153 YHAIAERRRRDKLSQRFIALAKVIPCF-----EKKDKRSVLEEAIKYVKQLQ 199
                     599***********************7.....6999999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MYVEVDKDID MTSCKEQNDE DDTATSGDVS NTANLDIILP EILLKVFDEK ILLNVFCEKR  60
KGILTTILKE VEKYDLRVVN CSTIPFDNKA MDITIVAQRA LSSCTTDDQD FGEIGVDGTL  120
HRGGFEVPEA KESRGCNNRT GSMALNSSLL SQYHAIAERR RRDKLSQRFI ALAKVIPCFE  180
KKDKRSVLEE AIKYVKQLQE RVKDLEEKAK PQNVESAMLV KRKHKNKETV DLQFPEIEAK  240
VSNKDVLLRI YCKNQHGLLE TILNEMEKVN LSINGTSFLS FGNHDMDITT IAKMNENFGI  300
TAKELVQKLR MVL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERRRRD
2159164RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.14e-38bHLH family protein