PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005873-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 268aa    MW: 30355.7 Da    PI: 5.381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005873-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10107161455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkas...kapskKlsKaeiLekAveYIksLq 55 
                      h  +ErrRR+++ ++f  L  l+P +         K +Ka+iL ++veY+k+L+
  AUR62005873-RA 107 EHVVAERRRREKMTQGFIALSALIPGLKklhIHILIKTDKASILGETVEYLKQLE 161
                     5889**********************86576556678****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEMSSGEWLS DLENEDPTSI MHHCQMMMSS DVFEFEDIFQ APDLILDTKI KSNNFEPVME  60
ATNKITPSID CDWSSSGKLI CFGSSDFETK PELSNGNNKR VMLTSNEHVV AERRRREKMT  120
QGFIALSALI PGLKKLHIHI LIKTDKASIL GETVEYLKQL EDRAKVLEEQ TSKRTMESVC  180
LVNKIQTQTF DDAANSFSYS NKIMSPDDNL EIEAKVVNNN IFIRVHSLKN HGLIHHILEE  240
IGKLNLTTLN CQTMPFGSYA INITILAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112117ERRRRE
2113118RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-31bHLH family protein