PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005744-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 462aa MW: 51935.3 Da PI: 7.5542

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005744-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.2	2.1e-14	33	77	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl AUR62005744-RA 33 TWTQEEDDILREQISIHGTENWTIIASKFK-DKTTRQCRRRWYTYL 77 6**************************9.***********97 PP
2	Myb_DNA-binding	43.7	6.3e-14	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + AUR62005744-RA 83 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 126 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MTTSTLQKKQ QIHEDNNSIS NTSSKPKERR IVTWTQEEDD ILREQISIHG TENWTIIASK 60 FKDKTTRQCR RRWYTYLNSD FKKGGWSPEE DMLLCEAQKI FGNRWTEIAK VVSGRTDNAV 120 KNRFSTLCKK KAKREALAKE NSNAAINVNN KRILIDSNGF RLQAVDGIAS PLKKFRREHI 180 PNQAVNFNSG NMLLKEYGLT RQHPRPPFAV LAQNVRNVDK SLVSTTKDAL INGDKKFDGT 240 FLRKDDPKVA ALMQQAELLS SLAVKVNMDS TEQNLENAWK VLQNFFGRSK ENEELGHKIE 300 ESDLQLDDFK ALVESLRSSN DGIPLSQSQH EVYESPSSSE YSTGSTNLSA CDQGEHSQGE 360 ISTMHEDIVA TSQSLQIADD GCVDMPHNKF LSCATADQEF NSPIQVTPLF RTLASTIPSP 420 QFSESERHFL LRTLGIESPT QSTITNPMQP PPCRKALLQG L*

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MTTSTLQKKQ QIHEDNNSIS NTSSKPKERR IVTWTQEEDD ILREQISIHG TENWTIIASK  60
FKDKTTRQCR RRWYTYLNSD FKKGGWSPEE DMLLCEAQKI FGNRWTEIAK VVSGRTDNAV  120
KNRFSTLCKK KAKREALAKE NSNAAINVNN KRILIDSNGF RLQAVDGIAS PLKKFRREHI  180
PNQAVNFNSG NMLLKEYGLT RQHPRPPFAV LAQNVRNVDK SLVSTTKDAL INGDKKFDGT  240
FLRKDDPKVA ALMQQAELLS SLAVKVNMDS TEQNLENAWK VLQNFFGRSK ENEELGHKIE  300
ESDLQLDDFK ALVESLRSSN DGIPLSQSQH EVYESPSSSE YSTGSTNLSA CDQGEHSQGE  360
ISTMHEDIVA TSQSLQIADD GCVDMPHNKF LSCATADQEF NSPIQVTPLF RTLASTIPSP  420
QFSESERHFL LRTLGIESPT QSTITNPMQP PPCRKALLQG L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-140	MYB family protein