PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005693-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 317aa    MW: 33716.2 Da    PI: 5.1435
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005693-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.39.9e-12184229555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  AUR62005693-RA 184 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 229
                     99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEGAGGMQHS ECEVNLDDLQ QQQNGESQSQ QQYQESQNDD FLDQMLSTIP NCSWPPTPHH  60
DLPSPSSNNH NPNNSNSNLS LKPGDSHSPP DDHHRYPFDE ASPADAAPPG MLPMPLTLGN  120
TDSVDPSSFK SQGGNMSGGQ NFGGQGGGMN QAPPASASTG GSSGAGAPQR QRVRARRGQA  180
TDPHSIAERL RRERIAERMK GLQELVPNAN KTDKASMLDE IIDYVKFLQL QVKVLSMSRL  240
GGAAAVAPLV AASEGGVGRN SNGNQPTSTN DSMTITEHQV AKLMEEDMGS AMQYLQGKGL  300
AQKPVLELKQ ISNVVL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.13e-41bHLH family protein