PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005466-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 323aa    MW: 36176.9 Da    PI: 6.9907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005466-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.31.8e-0850762955
             AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
                     r +lg+++taeeAa a++ a+++++g
  AUR62005466-RA 50 ERRWLGTYDTAEEAACAYDSAARAMHG 76
                    678**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDPQFKHHHY YFTTTYTNSF DDTPEKPLEP AKKAPRPRPR LRPRDTESKE RRWLGTYDTA  60
EEAACAYDSA ARAMHGSKAR TNFTYSTTSP HLDHGIMYPP PLPPFFSNPS NNKKKSQPST  120
KSKTTTSNSN PGHPNPTFVE WLNSTQTQTQ NHHNMINGCD EGMMVGFTEF PVAASQRNKK  180
KVNYCNKFSE LFPSSSPHSD IILLPSNSSS STVYNNHDDQ NHANDEINGG GGTMELFPSE  240
PSDSSSGLLE EIIEKYFPKR TPSNLIGSMM PGGSGGNYQM VEVPQYEYNE QEHHHCHVGG  300
TFQYNELYNM FATPRGAKCL GH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.14e-07ERF family protein