PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005168-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 180aa    MW: 19765 Da    PI: 6.16
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005168-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB159.35.7e-50398297
           NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                     e+dr+lPianv+rimk++lP  akisk aket+qecv+efisfvt+easdkc++e+rkt+ngdd++wal+tlGf+++ e+++ yl+kyre+e+ek
  AUR62005168-RA  3 DETDRLLPIANVGRIMKQILPPSAKISKGAKETMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSTLGFDNHGEAITRYLHKYREFEREK 98
                    689******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVDETDRLLP IANVGRIMKQ ILPPSAKISK GAKETMQECV TEFISFVTGE ASDKCHKENR  60
KTVNGDDICW ALSTLGFDNH GEAITRYLHK YREFEREKAC QGKGGEESGV VLLGVVGGRG  120
SSNSTEERDL DEETATKFGS HGGGRDHHHQ LDVENSGFPL EFRIIDPKGK SPFRNNNSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.14e-53NF-YB family protein