PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005105-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 308aa    MW: 34682.7 Da    PI: 6.4422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005105-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.7e-1393144155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++     ++ + a+i+  A++++k+L+
  AUR62005105-RA  93 QRMTHIAVERNRRKQMNEYLNVLRSLMPES---FVQRGDQASIVGAAINFVKELE 144
                     79***************************9...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MPFSDFDWHS YYYSHHNDDG VIPPTCSVVS DLPPLNSYDH ECWRLANSSS PDKEREPKVV  60
EGYDDGVAME MLMRPKQRRR ARAKKNQEEI ENQRMTHIAV ERNRRKQMNE YLNVLRSLMP  120
ESFVQRGDQA SIVGAAINFV KELEHNVQNL SAKKQMKENL ESNGNSSSSS TTMPFGEFFT  180
FPQFSSNSNL DNEDQTKASG ATSPQQLDHA SVRGSTSSGG LAADVEVTMV ESHAHLKIRL  240
RRPPKQLSKL VSGLHSLRLS VLHLNVNTAD DGVVLYSFSL KVEDESKLNS VDEIAREVYQ  300
LLGRIQE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194105RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-66bHLH family protein