PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004996-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GeBP
Protein Properties Length: 278aa    MW: 30836.7 Da    PI: 8.4523
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004996-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573121.15.6e-3837135297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     lfqrlw++eDei lLqG++d+++++g+     ++d+ afy+++k++++++++k+qlveK+rrLKkK+++  +k++sgke++f+++hdq +fels+
  AUR62004996-RA  37 LFQRLWTDEDEIELLQGFLDYTSSRGTtssGHHHDTAAFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVISKMSSGKEFVFKSPHDQATFELSR 131
                     79************************97644566************************************************************* PP

          DUF573  94 kiWg 97 
                     kiW 
  AUR62004996-RA 132 KIWS 135
                     ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
LPDPKRHRVD HLSSSSSLVV SPVVNPEKKP IDDSRRLFQR LWTDEDEIEL LQGFLDYTSS  60
RGTTSSGHHH DTAAFYDQIK SKLQLEFNKN QLVEKLRRLK KKYRNVISKM SSGKEFVFKS  120
PHDQATFELS RKIWSNISPN FRGVAEFDDD DQNPNPNLGT NFASATPPRP PNSSFGLIEE  180
AVRSCLSPMV KDMVNNTVNG TVFGGSSGGI KGVGALALNA VPLNFSGVNS VGGSGGDVMD  240
DKWRKQQILE LEVYSKRLEL VQDQIKLSLD ELRSMGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-49GeBP family protein