PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004948-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 402aa MW: 42790.4 Da PI: 5.9478

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004948-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.4	1.1e-16	195	247	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l ++++ AUR62004948-RA 195 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISQK 247 689****************************************9888877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MNRSASEWAF ERFLQETSPI SDSSSSKSMA ENDAVEIKDP PNSAAASGTA ATSAAAATTA 60 DVTSKYNNLG AQSLGNGTTS LNRQGSSVVP IDSDDYHAVL KNKLNLACAA APFVMNQNSA 120 VAADNVKQGS ADSRPASIPP CKGSLDKDSK PIGILSPPTL PKKPVVQANQ TTSYDSDQSD 180 DDDLEGETDN MDPADVKRVR RMLSNRESAR RSRRRKQAHL TELETQVSQL RGENSSLLKR 240 LTDISQKFND AAVDNRVLKA DVETLRAKVK MAEETVKRVT GMNPLLQAMS EITAMGMGPF 300 GGSPCPSDSA DAAVPVQDDP KQTHYYQPVD NPHPASHPRA DNGVTDIPSI DDVLQNAATQ 360 VLGGSKIART SSMQRVASLE HLQKRIRGGM DQGSPHGGPE Q*

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MNRSASEWAF ERFLQETSPI SDSSSSKSMA ENDAVEIKDP PNSAAASGTA ATSAAAATTA  60
DVTSKYNNLG AQSLGNGTTS LNRQGSSVVP IDSDDYHAVL KNKLNLACAA APFVMNQNSA  120
VAADNVKQGS ADSRPASIPP CKGSLDKDSK PIGILSPPTL PKKPVVQANQ TTSYDSDQSD  180
DDDLEGETDN MDPADVKRVR RMLSNRESAR RSRRRKQAHL TELETQVSQL RGENSSLLKR  240
LTDISQKFND AAVDNRVLKA DVETLRAKVK MAEETVKRVT GMNPLLQAMS EITAMGMGPF  300
GGSPCPSDSA DAAVPVQDDP KQTHYYQPVD NPHPASHPRA DNGVTDIPSI DDVLQNAATQ  360
VLGGSKIART SSMQRVASLE HLQKRIRGGM DQGSPHGGPE Q*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	217	RRSRRRKQ
2	212	217	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-50	bZIP family protein