PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004765-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 443aa MW: 48588.8 Da PI: 6.4215

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004765-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.1e-16	53	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W++I +++g +t+ q++s+ qk+ AUR62004765-RA 53 RERWTEEEHNRFLEALKLYGRA-WRKIEEHVG-SKTAVQIRSHAQKF 97 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MLSSSSNMAA QEETSAAQSS SGNKNSPAAG VQSAVGEGQV PKIRKPYTIT KQRERWTEEE 60 HNRFLEALKL YGRAWRKIEE HVGSKTAVQI RSHAQKFFSK VVRETSNSNA SSVEPIEIPP 120 PRPKRKPSHP YPRKLVLPSR KDMPMEQGAR SVSPNSSLSE QDNQSPTSVL SAVASDMLAS 180 ADSAATKSNS PSPVSSGNFG NEVARLRSED NASQGEVHES KSGSVAPASV KLELFSDKES 240 SDKEESGSTK VLKLFGKDVV VSGNSESFTC LSKSPSSDMG EGVVQAYQED CKPDNCREAQ 300 DHVKFNCEHS NTYQVEKPIP LPWWVFFKGM SVPPFKDPQE KENQRDGSSA DSDSGSVNEG 360 ENPDKNWEME TGSGQCGLQS DKESKSVEDS CTPKELTLIE KRCVDKGRKG FVPYKRCLSE 420 RDMQSSTIPN EERESQRIRL CL*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MLSSSSNMAA QEETSAAQSS SGNKNSPAAG VQSAVGEGQV PKIRKPYTIT KQRERWTEEE  60
HNRFLEALKL YGRAWRKIEE HVGSKTAVQI RSHAQKFFSK VVRETSNSNA SSVEPIEIPP  120
PRPKRKPSHP YPRKLVLPSR KDMPMEQGAR SVSPNSSLSE QDNQSPTSVL SAVASDMLAS  180
ADSAATKSNS PSPVSSGNFG NEVARLRSED NASQGEVHES KSGSVAPASV KLELFSDKES  240
SDKEESGSTK VLKLFGKDVV VSGNSESFTC LSKSPSSDMG EGVVQAYQED CKPDNCREAQ  300
DHVKFNCEHS NTYQVEKPIP LPWWVFFKGM SVPPFKDPQE KENQRDGSSA DSDSGSVNEG  360
ENPDKNWEME TGSGQCGLQS DKESKSVEDS CTPKELTLIE KRCVDKGRKG FVPYKRCLSE  420
RDMQSSTIPN EERESQRIRL CL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	8e-45	MYB_related family protein