PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004422-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 309aa MW: 33988.1 Da PI: 5.2835

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004422-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	142.1	1.3e-44	120	212	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 reqd+++Pian++ri+++vlP+nak+++ ak ++qecvsefisf+tsea++kcq+e+rkti+++d++ a++ lG+++yve l +yl+kyre e AUR62004422-RA 120 REQDHYMPIANLVRIIRQVLPSNAKVADGAKVMLQECVSEFISFITSEANEKCQQEHRKTITAEDVIVAMSRLGLDHYVELLYIYLQKYRENE 212 89****************************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MQEENSNNQP MPAIAKPILF SSFIENPNSQ PNVEENWSHD QHMDQTNAPH FVAPLGTMPL 60 IGDIGGHGVR MTNSNQSSML NQTEQNHQNQ GNICNNMNPD LHTNHGTKIP KFKAPVMPFR 120 EQDHYMPIAN LVRIIRQVLP SNAKVADGAK VMLQECVSEF ISFITSEANE KCQQEHRKTI 180 TAEDVIVAMS RLGLDHYVEL LYIYLQKYRE NELYPPVPRS GFENIAFATN GLPSFVGVHP 240 QSAMFSTSSG TDCGPISTSQ GLYTYPVGDS IGPSLALGIG EASESEGVGP SEPPHTDQYF 300 CSPCGHYK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-40	NF-YB family protein