PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004033-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

AP2

Protein Properties

Length: 373aa MW: 40839.2 Da PI: 9.4355

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004033-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.4	7.1e-13	143	199	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++t+e+Aa+a++ a++k++g AUR62004033-RA 143 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDTEEKAARAYDMAALKYWG 199 78*****************87776664446655.77****************98 PP
2	AP2	48.1	2.9e-15	242	293	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g AUR62004033-RA 242 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 293 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MGGETEISAG LRNWVQRSYI GCMGSVDADH HHQNQINGGD QTVSVSSNGG PANGPSAGPM 60 GGIGYADLQS LSLSMSPGSQ SSCVSGSHQQ QHQITPTNVT PMGAESSCLG IEISRKRGGE 120 RIEHNTKQIV HRKSLDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQGGY 180 DTEEKAARAY DMAALKYWGS STHINFPLDN YQQQLEDMKN MTRQEFVAHL RRKSSGFSRG 240 ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGTNAVTNF 300 DIASLSSSRE ESPEKNTNSS LPLAFTMPPS ATKLFANPAA NIGTWINQPV ELRAPSISLS 360 QIPVFAAWAD LH*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MGGETEISAG LRNWVQRSYI GCMGSVDADH HHQNQINGGD QTVSVSSNGG PANGPSAGPM  60
GGIGYADLQS LSLSMSPGSQ SSCVSGSHQQ QHQITPTNVT PMGAESSCLG IEISRKRGGE  120
RIEHNTKQIV HRKSLDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQGGY  180
DTEEKAARAY DMAALKYWGS STHINFPLDN YQQQLEDMKN MTRQEFVAHL RRKSSGFSRG  240
ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGTNAVTNF  300
DIASLSSSRE ESPEKNTNSS LPLAFTMPPS ATKLFANPAA NIGTWINQPV ELRAPSISLS  360
QIPVFAAWAD LH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-120	AP2 family protein